Season 38 : Passing
| Player | Games | Completions | Attempts | % | Yards | Average | TD | INT | QB Rating | ||
| 1. | Joe Montana  Nos |  | 16 | 161 | 239 | 67.36% | 3412 | 14.28 | 48 | 6 | 139.43 |
| 2. | Jim Everett  vikingmoe0 |  | 16 | 112 | 172 | 65.12% | 2830 | 16.45 | 36 | 7 | 131.06 |
| 3. | Steve Young  Prime |  | 16 | 117 | 230 | 50.87% | 2644 | 11.5 | 34 | 16 | 102.97 |
| 4. | Vinny Testaverde Jesusluvsm |  | 16 | 96 | 188 | 51.06% | 2339 | 12.44 | 30 | 8 | 118.33 |
| 5. | Erik Wilhelm ziur1 |  | 16 | 74 | 158 | 46.84% | 2442 | 15.46 | 27 | 13 | 98.5 |
| 6. | Tony Eason gats |  | 16 | 95 | 161 | 59.01% | 1985 | 12.33 | 23 | 7 | 124.09 |
| 7. | Don Majkowski DarthRockm |  | 16 | 55 | 119 | 46.22% | 1483 | 12.46 | 17 | 8 | 104.1 |
| 8. | Timm Rosenbach flash80 |  | 16 | 59 | 144 | 40.97% | 1547 | 10.74 | 17 | 10 | 91.41 |
| 9. | Ken O.brien Casual_T |  | 16 | 68 | 157 | 43.31% | 2028 | 12.92 | 14 | 12 | 88.14 |
| 10. | Andre Ware discdolo |  | 16 | 76 | 122 | 62.3% | 1910 | 15.66 | 13 | 8 | 114.28 |
